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    SEC Form SC 13D/A filed by Rhythm Pharmaceuticals Inc. (Amendment)

    4/17/24 4:15:26 PM ET
    $RYTM
    Biotechnology: Pharmaceutical Preparations
    Health Care
    Get the next $RYTM alert in real time by email
    SC 13D/A 1 d803502dsc13da.htm SC 13D/A SC 13D/A

     

     

    SECURITIES AND EXCHANGE COMMISSION

    Washington, D.C. 20549

     

     

    SCHEDULE 13D/A

    Under the Securities Exchange Act of 1934

    (Amendment No. 2)*

     

     

    Rhythm Pharmaceuticals, Inc.

    (Name of Issuer)

    Common Stock, par value $0.001 per share

    (Title of Class of Securities)

    76243J105

    (CUSIP Number)

    Alexander Rakitin

    Perceptive Advisors LLC

    51 Astor Place, 10th Floor

    New York, NY 10003

    (646) 205-5340

    (Name, Address and Telephone Number of Person

    Authorized to Receive Notices and Communications)

    April 15, 2024

    (Date of Event Which Requires Filing of this Statement)

     

     

    If the filing person has previously filed a statement on Schedule 13G to report the acquisition that is the subject of this Schedule 13D, and is filing this schedule because of §§ 240.13d-1(e), 240.13d-1(f) or 240.13d-1(g), check the following box. ☐

     

     

    Note: Schedules filed in paper format shall include a signed original and five copies of the schedule, including all exhibits. See Section 240.13d-7 for other parties to whom copies are to be sent.

     

     

     

    *

    The remainder of this cover page shall be filled out for a reporting person’s initial filing on this form with respect to the subject class of securities, and for any subsequent amendment containing information which would alter disclosures provided in a prior cover page.

    The information required on the remainder of this cover page shall not be deemed to be “filed” for the purpose of Section 18 of the Securities Exchange Act of 1934, as amended (the “Act”) or otherwise subject to the liabilities of that section of the Act but shall be subject to all other provisions of the Act (however, see the Notes).

     

     

     


    CUSIP No. 76243J105

     

     1.   

     Names of Reporting Persons.

     

     Perceptive Advisors LLC

     2.  

     Check the Appropriate Box if a Member of a Group (See Instructions)

     (a) ☐  (b) ☒

     

     3.  

     SEC Use Only

     

     4.  

     Source of Funds (See Instructions)

     

     AF

     5.  

     Check if Disclosure of Legal Proceedings Is Required Pursuant to Items 2(d) or 2(e)

     

     ☐

     6.  

     Citizenship or Place of Organization

     

     Delaware

    Number of

    Shares  Beneficially 

    Owned by

    Each

    Reporting

    Person

    With

     

        7.    

     Sole Voting Power

     

     0

        8.   

     Shared Voting Power

     

     5,143,575

        9.   

     Sole Dispositive Power

     

     0

       10.   

     Shared Dispositive Power

     

     5,143,575

    11.   

     Aggregate Amount Beneficially Owned by Each Reporting Person

     

     5,143,575

    12.  

     Check if the Aggregate Amount in Row (11) Excludes Certain Shares (See Instructions)

     

     ☐

    13.  

     Percent of Class Represented by Amount in Row (11)

     

     8.3%

    14.  

     Type of Reporting Person (See Instructions)

     

     OO


    CUSIP No. 76243J105

     

     1.   

     Names of Reporting Persons.

     

     Perceptive Life Sciences Master Fund, Ltd.

     2.  

     Check the Appropriate Box if a Member of a Group (See Instructions)

     (a) ☐  (b) ☒

     

     3.  

     SEC Use Only

     

     4.  

     Source of Funds (See Instructions)

     

     WC

     5.  

     Check if Disclosure of Legal Proceedings Is Required Pursuant to Items 2(d) or 2(e)

     

     ☐

     6.  

     Citizenship or Place of Organization

     

     Cayman Islands

    Number of

    Shares  Beneficially 

    Owned by

    Each

    Reporting

    Person

    With

     

        7.    

     Sole Voting Power

     

     0

        8.   

     Shared Voting Power

     

     3,685,245

        9.   

     Sole Dispositive Power

     

     0

       10.   

     Shared Dispositive Power

     

     3,685,245

    11.   

     Aggregate Amount Beneficially Owned by Each Reporting Person

     

     3,685,245

    12.  

     Check if the Aggregate Amount in Row (11) Excludes Certain Shares (See Instructions)

     

     ☐

    13.  

     Percent of Class Represented by Amount in Row (11)

     

     6.1%

    14.  

     Type of Reporting Person (See Instructions)

     

     CO


    CUSIP No. 76243J105

     

     1.   

     Names of Reporting Persons.

     

     C2 Life Sciences LLC

     2.  

     Check the Appropriate Box if a Member of a Group (See Instructions)

     (a) ☐  (b) ☒

     

     3.  

     SEC Use Only

     

     4.  

     Source of Funds (See Instructions)

     

     WC

     5.  

     Check if Disclosure of Legal Proceedings Is Required Pursuant to Items 2(d) or 2(e)

     

     ☐

     6.  

     Citizenship or Place of Organization

     

     Delaware

    Number of

    Shares  Beneficially 

    Owned by

    Each

    Reporting

    Person

    With

     

        7.    

     Sole Voting Power

     

     0

        8.   

     Shared Voting Power

     

     104,166

        9.   

     Sole Dispositive Power

     

     0

       10.   

     Shared Dispositive Power

     

     104,166

    11.   

     Aggregate Amount Beneficially Owned by Each Reporting Person

     

     104,166

    12.  

     Check if the Aggregate Amount in Row (11) Excludes Certain Shares (See Instructions)

     

     ☐

    13.  

     Percent of Class Represented by Amount in Row (11)

     

     < 0.1%

    14.  

     Type of Reporting Person (See Instructions)

     

     CO


    CUSIP No. 76243J105

     

     1.   

     Names of Reporting Persons.

     

     Perceptive Discovery Fund LP

     2.  

     Check the Appropriate Box if a Member of a Group (See Instructions)

     (a) ☐  (b) ☒

     

     3.  

     SEC Use Only

     

     4.  

     Source of Funds (See Instructions)

     

     WC

     5.  

     Check if Disclosure of Legal Proceedings Is Required Pursuant to Items 2(d) or 2(e)

     

     ☐

     6.  

     Citizenship or Place of Organization

     

     Delaware

    Number of

    Shares  Beneficially 

    Owned by

    Each

    Reporting

    Person

    With

     

        7.    

     Sole Voting Power

     

     0

        8.   

     Shared Voting Power

     

     1,354,164

        9.   

     Sole Dispositive Power

     

     0

       10.   

     Shared Dispositive Power

     

     1,354,164

    11.   

     Aggregate Amount Beneficially Owned by Each Reporting Person

     

     1,354,164

    12.  

     Check if the Aggregate Amount in Row (11) Excludes Certain Shares (See Instructions)

     

     ☐

    13.  

     Percent of Class Represented by Amount in Row (11)

     

     2.2%

    14.  

     Type of Reporting Person (See Instructions)

     

     PN


    CUSIP No. 76243J105

     

     1.   

     Names of Reporting Persons.

     

     Joseph Edelman

     2.  

     Check the Appropriate Box if a Member of a Group (See Instructions)

     (a) ☐  (b) ☒

     

     3.  

     SEC Use Only

     

     4.  

     Source of Funds (See Instructions)

     

     AF

     5.  

     Check if Disclosure of Legal Proceedings Is Required Pursuant to Items 2(d) or 2(e)

     

     ☐

     6.  

     Citizenship or Place of Organization

     

     United States of America

    Number of

    Shares  Beneficially 

    Owned by

    Each

    Reporting

    Person

    With

     

        7.    

     Sole Voting Power

     

     0

        8.   

     Shared Voting Power

     

     5,143,575

        9.   

     Sole Dispositive Power

     

     0

       10.   

     Shared Dispositive Power

     

     5,143,575

    11.   

     Aggregate Amount Beneficially Owned by Each Reporting Person

     

     5,143,575

    12.  

     Check if the Aggregate Amount in Row (11) Excludes Certain Shares (See Instructions)

     

     ☐

    13.  

     Percent of Class Represented by Amount in Row (11)

     

     8.3%

    14.  

     Type of Reporting Person (See Instructions)

     

     IN


    Item 2.

    Identity and Background

    Items 2(a) - (c) of the Schedule 13D are amended and restated as follows:

     

      (a)

    This Amendment No. 2 is being filed by Perceptive Advisors LLC (“Perceptive Advisors” or “Perceptive”), Joseph Edelman (“Mr. Edelman”), Perceptive Life Sciences Master Fund, Ltd. (the “Master Fund”), Perceptive Discovery Fund, LP (the “Discovery Fund”), and C2 Life Sciences LLC (“C2”, and together with Perceptive Advisors, Mr. Edelman, the Master Fund and the Discovery Fund, each of the foregoing, a “Reporting Person,” and collectively, the “Reporting Persons”). Perceptive Advisors serves as the investment advisor to the Master Fund and C2. Mr. Edelman is the managing member of Perceptive Advisors. Perceptive Discovery GP LLC is the general partner of Perceptive Discovery ID LP, and is managed by Perceptive Discovery Advisors, a relying advisor of Perceptive Advisors LLC. The agreement among the Reporting Persons to file this Schedule 13D jointly in accordance with Rule 13d-1(k) of the Securities Exchange Act of 1934, as amended, is attached hereto as Exhibit 5.

     

      (b)

    The address of the principal business office of each of the Reporting Persons is 51 Astor Place 10th Floor, New York, NY 10003.

     

      (c)

    The principal business of Perceptive Advisors is managing funds in connection with purchasing, holding and selling securities for investment purposes. The principal business of the Master Fund, the Discovery Fund and C2 are to invest in securities. The principal occupation of Mr. Edelman is as the managing member of Perceptive Advisors and other related entities.

     

    Item 3.

    Source and Amount of Funds

    Item 3 of the Schedule 13D is amended and supplemented as follows:

    The source of funds for the acquisition of the Series A Convertible Preferred Stock reported herein was the working capital of the Master Fund, Discovery Fund and C2.

     

    Item 4.

    Purpose of Transaction

    Item 4 of the Schedule 13D is amended and supplemented as follows:

    The Information set forth in Item 6 below in this Amendment No. 2 is incorporated by reference into this Item 4.

     

    Item 5.

    Interest in Securities of the Issuer

    Item 5 of the Schedule 13D is amended and supplemented as follows:

     

      (a)

    The information set forth in rows 11 and 13 of the cover pages to this Schedule 13D is incorporated by reference. The percentage set forth in row 13 is based on 60,140,495 outstanding shares of Common Stock as reported by the Issuer in its Annual Report on Form 10-K filed with the Securities and Exchange Commission on February 23, 2024, and give effect to the conversion of 90,000 shares of the Issuer’s Series A Convertible Preferred Stock, par value $0.001 per share (the “Series A Convertible Preferred Stock”) held by the Reporting Persons at the current Conversion Rate of 20.8333 shares of Common Stock to be issued upon the conversion of each $1,000 of liquidation preference. The shares of Series A Convertible Preferred Stock will be convertible into shares of Common Stock at the option of the holders thereof at any time following the expiration or termination of any applicable waiting period under the Hart-Scott-Rodino Antitrust Improvements Act of 1976, as amended.

     

      (b)

    The information set forth in rows 7 through 10 of the cover pages to this Schedule 13D is incorporated by reference and give effect to the conversion of the Series A Convertible Preferred Stock directly held by such Reporting Persons at the Conversion Rate.

     

      (c)

    On April 15, 2024, the Discovery Fund acquired 65,000 shares of Series A Convertible Preferred Stock, the Master Fund acquired 20,000 shares of Series A Convertible Preferred Stock, and C2 acquired 5,000 shares of Series A Convertible Preferred Stock, at a price of $1,000 per share pursuant to the terms of the Investment Agreement dated April 1, 2024.


    Item 6.

    Contracts, Arrangements, Understandings or Relationships with Respect to Securities of the Issuer

    Item 6 of the Schedule 13D is amended and supplemented as follows:

    On April 15, 2024, the Discovery Fund, the Master Fund, and C2 entered into the Registration Rights Agreement with the Issuer, a copy of which is attached hereto as Exhibit 3.

    On April 15, 2024, the Issuer filed the Certificate of Designations setting forth the terms of the Series A Convertible Preferred Stock with the Secretary of State of the State of Delaware, a copy of which is attached hereto as Exhibit 4.

     

    Item 7.

    Material to be Filed as Exhibits

    Item 7 of the Schedule 13D is amended and supplemented as follows:

     

      Exhibit 3

    Form of Registration Rights Agreement by and between the Issuer and the investors named therein (incorporated by reference to Exhibit B of Exhibit 10.1 to the Issuer’s Current Report on Form 8-K filed on April 1, 2024).

     

      Exhibit 4

    Certificate of Designations (incorporated by reference to Exhibit 3.1 to the Issuer’s Current Report on Form 8-K filed on April 16, 2024).

     

      Exhibit 5

    Joint Filing Agreement.


    SIGNATURES

    After reasonable inquiry and to the best of my knowledge and belief, I certify that the information set forth in this statement is true, complete and correct.

    Dated: April 17, 2024

     

    PERCEPTIVE ADVISORS LLC
    By:   /s/ Joseph Edelman
    Name:   Joseph Edelman
    Title:   Managing Member

    /s/ Joseph Edelman

    JOSEPH EDELMAN
    PERCEPTIVE LIFE SCIENCES MASTER FUND, LTD.
    By:   /s/ Joseph Edelman
    Name:   Joseph Edelman
    Title:   Managing Member
    PERCEPTIVE DISCOVERY FUND LP
    By: Perceptive Discovery GP, LLC, its general partner
    By:   /s/ Joseph Edelman
    Name:   Joseph Edelman
    Title:   Managing Member
    C2 LIFE SCIENCES LLC
    By:   /s/ Joseph Edelman
    Name:   Joseph Edelman
    Title:   Managing Member
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    • EVP, Head of International Mazabraud Yann converted options into 21,780 shares, increasing direct ownership by 96% to 44,400 units (SEC Form 4)

      4 - RHYTHM PHARMACEUTICALS, INC. (0001649904) (Issuer)

      4/16/25 4:30:22 PM ET
      $RYTM
      Biotechnology: Pharmaceutical Preparations
      Health Care

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    SEC Filings

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    • SEC Form 10-Q filed by Rhythm Pharmaceuticals Inc.

      10-Q - RHYTHM PHARMACEUTICALS, INC. (0001649904) (Filer)

      5/7/25 4:46:19 PM ET
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      Biotechnology: Pharmaceutical Preparations
      Health Care
    • Rhythm Pharmaceuticals Inc. filed SEC Form 8-K: Results of Operations and Financial Condition, Financial Statements and Exhibits

      8-K - RHYTHM PHARMACEUTICALS, INC. (0001649904) (Filer)

      5/7/25 7:01:40 AM ET
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      Biotechnology: Pharmaceutical Preparations
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    • SEC Form DEFA14A filed by Rhythm Pharmaceuticals Inc.

      DEFA14A - RHYTHM PHARMACEUTICALS, INC. (0001649904) (Filer)

      4/29/25 4:01:46 PM ET
      $RYTM
      Biotechnology: Pharmaceutical Preparations
      Health Care